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Ping hail search endpoint that reloads globals at the end of the pipeline.
#892
opened Sep 10, 2024 by
bpblanken
Move sex checks out of data loading pipeline
Sex and Relatedness
#870
opened Aug 13, 2024 by
lynnpais
Pipeline should check the integrity of the metadata.json generated during a run.
bug
#859
opened Aug 1, 2024 by
bpblanken
Audit of Sample QC Genetic Ancestry Imputation on gnomAD v2+CMG vs gnomAD v4 Model
Seqr Sample QC
#853
opened Jul 26, 2024 by
matren395
Map fields produced by seqr sample qc pipeline to UI fields in seqr.
Seqr Sample QC
#849
opened Jul 26, 2024 by
bpblanken
Create a simple http interface that responds to http POSTs and kicks off the v03_pipeline.
#821
opened Jun 24, 2024 by
bpblanken
Lint/Refactor the
gencode
download.
Code Quality
Good First Issue
low priority
v3 pipeline
#609
opened Oct 31, 2023 by
bpblanken
Migrate from
nose
to a different unittest provider
Code Quality
#600
opened Oct 26, 2023 by
bpblanken
Port Seqr-Sample-QC into
v03_pipeline
Epic
Seqr Sample QC
v3 pipeline
#544
opened Jul 25, 2023 by
bpblanken
Add SQUIRLS in silico splice annotations
Reference Data
v3 pipeline
#318
opened Mar 7, 2022 by
anneodonnell
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