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@QTL-rocks

QTL.rocks

Quantitative genetics Lab at UC Davis

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  1. Distribution_of_LD Distribution_of_LD Public

    Forked from Jiayi-Qu/Distribution_of_LD

    This is a repository containing codes used in the paper "Exact Distribution of Linkage Disequilibrium in the Presence of Mutation, Selection or Minor Allele Frequency Filtering".

    Julia

  2. multi-class-Bayesian-Alphabet multi-class-Bayesian-Alphabet Public

    Forked from justinwang97/multi-class-Bayesian-Alphabet

    This is a repository containing codes used in the paper "Single-trait and Multiple-trait Genomic Prediction from Multi-class Bayesian Alphabet Models using Biological Information".

    Jupyter Notebook

  3. NN-Bayes NN-Bayes Public

    Forked from zhaotianjing/NN-Bayes

    This is a repository containing codes used in the paper "Interpretable Artificial Neural Networks incorporating Bayesian Alphabet Models for Genome-wide Prediction and Association Studies".

    Julia

  4. LMMonBoard LMMonBoard Public

    Forked from Poissonfish/LMMonBoard

    This is a repository containing codes for LMMonBoard, an interactive web app to teach linear mixed models.

    Python 1 1

  5. ShinyJWAS ShinyJWAS Public

    ShinyJWAS: Shiny-based application to help perform whole-genome Bayesian regression analysis with JWAS package

    R 2 3

  6. BayesXII BayesXII Public

    Forked from zhaotianjing/BayesXII

    This is a repository containing codes used in the paper "Fast parallelized sampling of Bayesian regression models for whole-genome prediction".

    Julia

Repositories

Showing 10 of 14 repositories
  • ShinyJWAS Public

    ShinyJWAS: Shiny-based application to help perform whole-genome Bayesian regression analysis with JWAS package

    QTL-rocks/ShinyJWAS’s past year of commit activity
    R 2 GPL-2.0 3 0 3 Updated Jan 9, 2024
  • QTL-rocks/MixedModelsforAgriculturalScience’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 3, 2023
  • SSNNMM Public Forked from zhaotianjing/SSNNMM

    This is a repository containing codes used in the paper "Interpreting single-step genomic evaluation as a neural network of three layers: pedigree, genotypes, and phenotypes"

    QTL-rocks/SSNNMM’s past year of commit activity
    Julia 0 MIT 1 0 0 Updated May 1, 2023
  • multi-class-Bayesian-Alphabet Public Forked from justinwang97/multi-class-Bayesian-Alphabet

    This is a repository containing codes used in the paper "Single-trait and Multiple-trait Genomic Prediction from Multi-class Bayesian Alphabet Models using Biological Information".

    QTL-rocks/multi-class-Bayesian-Alphabet’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Sep 13, 2021
  • LMMonBoard Public Forked from Poissonfish/LMMonBoard

    This is a repository containing codes for LMMonBoard, an interactive web app to teach linear mixed models.

    QTL-rocks/LMMonBoard’s past year of commit activity
    Python 1 2 0 0 Updated Jul 13, 2021
  • NN-Bayes Public Forked from zhaotianjing/NN-Bayes

    This is a repository containing codes used in the paper "Interpretable Artificial Neural Networks incorporating Bayesian Alphabet Models for Genome-wide Prediction and Association Studies".

    QTL-rocks/NN-Bayes’s past year of commit activity
    Julia 0 3 0 0 Updated Jun 22, 2021
  • scripts Public
    QTL-rocks/scripts’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 2 1 0 Updated Jan 8, 2021
  • Distribution_of_LD Public Forked from Jiayi-Qu/Distribution_of_LD

    This is a repository containing codes used in the paper "Exact Distribution of Linkage Disequilibrium in the Presence of Mutation, Selection or Minor Allele Frequency Filtering".

    QTL-rocks/Distribution_of_LD’s past year of commit activity
    Julia 0 1 0 0 Updated Nov 19, 2020
  • Plots Public
    QTL-rocks/Plots’s past year of commit activity
    R 0 MIT 1 0 0 Updated Nov 5, 2020
  • CardGame Public

    playing a card game with quantitative genetics

    QTL-rocks/CardGame’s past year of commit activity
    0 MIT 0 0 0 Updated Sep 1, 2020

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