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GATK4 RNA-seq short variant discovery (SNPs + Indels) #7

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skchronicles opened this issue Jan 14, 2021 · 0 comments
Open

GATK4 RNA-seq short variant discovery (SNPs + Indels) #7

skchronicles opened this issue Jan 14, 2021 · 0 comments
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enhancement New feature or request rna run rna-seek run related task

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Add an optional step(s) for RNA-seq variant calling using GATK4 best practices pipeline for RNA-seq short variant discovery.

Here is more information about the workflow

@skchronicles skchronicles added the enhancement New feature or request label Jan 14, 2021
@skchronicles skchronicles self-assigned this Jan 14, 2021
@skchronicles skchronicles added the rna run rna-seek run related task label Mar 25, 2021
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Labels
enhancement New feature or request rna run rna-seek run related task
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