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how to get protein feature information #181

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tangwei1129 opened this issue Jul 14, 2022 · 3 comments
Open

how to get protein feature information #181

tangwei1129 opened this issue Jul 14, 2022 · 3 comments

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@tangwei1129
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I tried to extract the protein feature/domain information, such as domain position and domain name, from https://www.ncbi.nlm.nih.gov/gene/5925, see below image as well, would you advice me how to extract such information?
Thank you so much,
Wei
NCI/NIH
image

@allenbaron
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What did you try?

@tangwei1129
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tangwei1129 commented Jul 15, 2022 via email

@allenbaron
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In my experience, E-utilities doesn't generally use the NM/NP identifiers. You might try using entrez_link() to access the gene database with your identifier (which appears to be 5925) and request the links to the protein database to get the protein ID you're interested in. Then use that ID in your entrez_fetch() command.

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